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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP21Ubiquitin specific peptidase 21. (472 aa)    
Predicted Functional Partners:
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.921
RNF41
Ring finger protein 41.
    
 0.822
ENSCPIP00010004314
annotation not available
    
 0.801
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.772
HGS
Hepatocyte growth factor-regulated tyrosine kinase substrate.
    
 0.730
STAM
Signal transducing adaptor molecule.
    
 0.713
STAM2
Signal transducing adaptor molecule 2.
    
 0.713
GATA3
GATA binding protein 3.
    
 0.641
ARL16
ADP ribosylation factor like GTPase 16.
    
 
 0.631
CHMP4B
Charged multivesicular body protein 4B.
    
 
 0.628
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.