STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE3AUbiquitin protein ligase E3A. (946 aa)    
Predicted Functional Partners:
UBE2L3
Ubiquitin conjugating enzyme E2 L3.
    
 0.964
PSMD4
Proteasome 26S subunit, non-ATPase 4.
    
 
 0.928
TSC2
TSC complex subunit 2.
    
 0.782
PSMD14
Proteasome 26S subunit, non-ATPase 14.
    
 
 0.778
CTNNB1
Catenin beta 1.
    
 0.761
NFX1
Nuclear transcription factor, X-box binding 1.
     
 0.741
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
   
 0.725
SNRPB
Small nuclear ribonucleoprotein polypeptides B and B1.
      
 0.721
LRRC1
Leucine rich repeat containing 1.
    
 0.703
SCRIB
Scribble planar cell polarity protein.
    
 0.703
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.