Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AP3D1Adaptor related protein complex 3 subunit delta 1. (1137 aa)    
Predicted Functional Partners:
AP3S1
Adaptor related protein complex 3 subunit sigma 1.
    
 0.996
AP3B2
Adaptor related protein complex 3 subunit beta 2.
   
 0.996
AP3B1
Adaptor related protein complex 3 subunit beta 1.
   
 0.996
AP3M1
Adaptor related protein complex 3 subunit mu 1.
   
 0.995
AP3M2
Adaptor related protein complex 3 subunit mu 2.
   
 0.995
VPS41
VPS41 subunit of HOPS complex.
   
 
 0.927
GAK
Cyclin G associated kinase.
   
 0.901
AP4B1
Adaptor related protein complex 4 subunit beta 1.
   
 0.842
AP2M1
Adaptor related protein complex 2 subunit mu 1.
   
 0.822
AP1B1
Adaptor related protein complex 1 subunit beta 1.
   
0.813
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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