Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPN5Calpain 5. (631 aa)    
Predicted Functional Partners:
CAST
Calpastatin.
    
 0.792
ENSCPIP00010004656
annotation not available
    
 0.581
SRI
Sorcin.
    
 0.504
PDCD6
Programmed cell death 6.
    
 0.504
ENSCPIP00010012885
annotation not available
    
  0.492
BAK1
BCL2 antagonist/killer 1.
     
 0.469
TLN1
Talin 1.
    
 0.458
TLN2
Talin 2.
    
 0.458
SRFBP1
Serum response factor binding protein 1.
      
 0.453
CAPN9
Calpain 9.
    
 0.401
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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