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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BUD23BUD23 rRNA methyltransferase and ribosome maturation factor. (164 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.994
BYSL
Bystin like.
   
 0.986
TSR1
TSR1 ribosome maturation factor.
   
 0.981
ENSCPIP00010000134
annotation not available
   
 0.976
TRMT61A
tRNA methyltransferase 61A.
  
 0.969
TRMT11
tRNA methyltransferase 11 homolog.
   
 0.969
ENSCPIP00010017354
annotation not available
    
 0.967
RPS6
Ribosomal protein S6.
    
 0.953
ENSCPIP00010000392
annotation not available
    
  0.952
WDR4
WD repeat domain 4.
   
 
 0.951
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.