Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BUD23BUD23 rRNA methyltransferase and ribosome maturation factor. (164 aa)    
Predicted Functional Partners:
BYSL
Bystin like.
   
 0.988
ENSCPIP00010000134
annotation not available
   
 0.984
TSR1
TSR1 ribosome maturation factor.
   
 0.964
NOP14
NOP14 nucleolar protein.
   
 
 0.961
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
   0.953
RRP12
Ribosomal RNA processing 12 homolog.
   
 
 0.948
RPS5
Ribosomal protein S5.
   
 0.938
ENSCPIP00010017354
annotation not available
    
 0.932
RPS13
Ribosomal protein S13.
    
  0.931
FAM207A
Family with sequence similarity 207 member A.
    
   0.931
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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