Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARRDC1Arrestin domain containing 1. (405 aa)    
Predicted Functional Partners:
WWP2
WW domain containing E3 ubiquitin protein ligase 2.
    
 
 0.985
WWP1
WW domain containing E3 ubiquitin protein ligase 1.
    
 
 0.983
ITCH
Itchy E3 ubiquitin protein ligase.
    
 
 0.974
TSG101
Tumor susceptibility 101.
   
 
 0.959
VPS37A
VPS37A subunit of ESCRT-I.
    
 
 0.942
ENSCPIP00010017141
annotation not available
    
   0.928
NELFA
Negative elongation factor complex member A.
     
  0.779
NELFCD
Negative elongation factor complex member C/D.
     
  0.779
NEDD4L
NEDD4 like E3 ubiquitin protein ligase.
    
 
 0.766
NEDD4
NEDD4 E3 ubiquitin protein ligase.
    
 
 0.766
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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