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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKZF1Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1. (711 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.957
SPATA5L1
Spermatogenesis associated 5 like 1.
   
 0.940
NEMF
Nuclear export mediator factor.
   
 
 0.903
TOMM40L
Translocase of outer mitochondrial membrane 40 like.
     
 0.898
TOMM70
Translocase of outer mitochondrial membrane 70.
     
 0.885
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 0.786
FAAP100
FA core complex associated protein 100.
    
 0.786
ENSCPIP00010011948
annotation not available
    
   0.772
ATAD1
ATPase family AAA domain containing 1.
    
 0.611
RPL3
Ribosomal protein L3.
    
 
 0.598
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.