ENSCPIP00010005338 protein (Chrysolophus pictus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCPIP00010005338

annotation not available (630 aa)

Predicted Functional Partners:

ARID4A

0.974

ARID4B

0.974

LEO1

0.917

DMAP1

0.822

TADA3

0.791

TRRAP

0.790

RUVBL1

0.790

MEAF6

0.776

GTF2F2

0.774

SGF29

0.773

Your Current Organism:

Chrysolophus pictus

NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSCPIP00010011878	ENSCPIP00010015503	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.669
ARID4A	DMAP1	ENSCPIP00010011878	ENSCPIP00010017786	AT-rich interaction domain 4A.	DNA methyltransferase 1 associated protein 1.	0.843
ARID4A	ENSCPIP00010005338	ENSCPIP00010011878	ENSCPIP00010005338	AT-rich interaction domain 4A.	annotation not available	0.974
ARID4A	MEAF6	ENSCPIP00010011878	ENSCPIP00010011266	AT-rich interaction domain 4A.	MYST/Esa1 associated factor 6.	0.820
ARID4A	RUVBL1	ENSCPIP00010011878	ENSCPIP00010008316	AT-rich interaction domain 4A.	RuvB like AAA ATPase 1.	0.694
ARID4A	TRRAP	ENSCPIP00010011878	ENSCPIP00010004999	AT-rich interaction domain 4A.	Transformation/transcription domain associated protein.	0.916
ARID4B	ARID4A	ENSCPIP00010015503	ENSCPIP00010011878	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.669
ARID4B	DMAP1	ENSCPIP00010015503	ENSCPIP00010017786	AT-rich interaction domain 4B.	DNA methyltransferase 1 associated protein 1.	0.843
ARID4B	ENSCPIP00010005338	ENSCPIP00010015503	ENSCPIP00010005338	AT-rich interaction domain 4B.	annotation not available	0.974
ARID4B	MEAF6	ENSCPIP00010015503	ENSCPIP00010011266	AT-rich interaction domain 4B.	MYST/Esa1 associated factor 6.	0.820
ARID4B	RUVBL1	ENSCPIP00010015503	ENSCPIP00010008316	AT-rich interaction domain 4B.	RuvB like AAA ATPase 1.	0.694
ARID4B	TRRAP	ENSCPIP00010015503	ENSCPIP00010004999	AT-rich interaction domain 4B.	Transformation/transcription domain associated protein.	0.916
DMAP1	ARID4A	ENSCPIP00010017786	ENSCPIP00010011878	DNA methyltransferase 1 associated protein 1.	AT-rich interaction domain 4A.	0.843
DMAP1	ARID4B	ENSCPIP00010017786	ENSCPIP00010015503	DNA methyltransferase 1 associated protein 1.	AT-rich interaction domain 4B.	0.843
DMAP1	ENSCPIP00010005338	ENSCPIP00010017786	ENSCPIP00010005338	DNA methyltransferase 1 associated protein 1.	annotation not available	0.822
DMAP1	MEAF6	ENSCPIP00010017786	ENSCPIP00010011266	DNA methyltransferase 1 associated protein 1.	MYST/Esa1 associated factor 6.	0.996
DMAP1	RUVBL1	ENSCPIP00010017786	ENSCPIP00010008316	DNA methyltransferase 1 associated protein 1.	RuvB like AAA ATPase 1.	0.996
DMAP1	SGF29	ENSCPIP00010017786	ENSCPIP00010013222	DNA methyltransferase 1 associated protein 1.	SAGA complex associated factor 29.	0.591
DMAP1	TRRAP	ENSCPIP00010017786	ENSCPIP00010004999	DNA methyltransferase 1 associated protein 1.	Transformation/transcription domain associated protein.	0.997
ENSCPIP00010005338	ARID4A	ENSCPIP00010005338	ENSCPIP00010011878	annotation not available	AT-rich interaction domain 4A.	0.974