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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM98AFamily with sequence similarity 98 member A. (556 aa)    
Predicted Functional Partners:
RTRAF
RNA transcription, translation and transport factor.
    
 0.991
DDX1
DEAD-box helicase 1.
   
 0.981
RTCB
RNA 2',3'-cyclic phosphate and 5'-OH ligase.
    
 0.963
FAM98B
Family with sequence similarity 98 member B.
    
 
0.897
ATXN2
Ataxin 2.
    
 
 0.676
EWSR1
EWS RNA binding protein 1.
    
 
 0.637
PRPF3
pre-mRNA processing factor 3.
   
  
 0.626
NUFIP2
Nuclear FMR1 interacting protein 2.
    
 
 0.624
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
      
 0.623
DHX15
DEAH-box helicase 15.
      
 0.619
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.