Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIPSNAP1Nipsnap homolog 1. (280 aa)    
Predicted Functional Partners:
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
   
    0.920
SQSTM1
Sequestosome 1.
    
 
 0.899
SNU13
Small nuclear ribonucleoprotein 13.
   
  
 0.782
NBR1
NBR1 autophagy cargo receptor.
    
 
 0.755
NUDCD1
NudC domain containing 1.
   
   0.742
ENSCPIP00010016577
annotation not available
     
 0.725
ASF1A
Anti-silencing function 1A histone chaperone.
   
    0.724
RPS27L
Ribosomal protein S27 like.
 
      0.716
RAB40B
RAB40B, member RAS oncogene family.
   
 
  0.713
GSAP
Gamma-secretase activating protein.
    
 
 0.681
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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