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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NSUN4NOP2/Sun RNA methyltransferase 4. (404 aa)    
Predicted Functional Partners:
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.912
BRIX1
Biogenesis of ribosomes BRX1.
   
 0.889
MTG1
Mitochondrial ribosome associated GTPase 1.
   
 0.878
GTPBP4
GTP binding protein 4.
   
 0.857
PUM3
Pumilio RNA binding family member 3.
   
  0.855
EBNA1BP2
EBNA1 binding protein 2.
   
 0.850
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.835
ENSCPIP00010001512
annotation not available
  
 0.827
NOC3L
NOC3 like DNA replication regulator.
   
 0.825
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 0.823
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.