USP40 protein (Chrysolophus pictus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

USP40

Ubiquitin specific peptidase 40. (1244 aa)

Predicted Functional Partners:

UBA52

0.916

ENSCPIP00010004314

0.897

GMPS

0.838

TRIP12

0.782

DNMT1

0.781

ENSCPIP00010013185

0.772

USP13

0.728

ANAPC2

0.721

ENSCPIP00010006046

0.686

ENSCPIP00010016157

0.686

Your Current Organism:

Chrysolophus pictus

NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ANAPC2	ENSCPIP00010004314	ENSCPIP00010010161	ENSCPIP00010004314	Anaphase promoting complex subunit 2.	annotation not available	0.904
ANAPC2	UBA52	ENSCPIP00010010161	ENSCPIP00010007394	Anaphase promoting complex subunit 2.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.903
ANAPC2	USP40	ENSCPIP00010010161	ENSCPIP00010007290	Anaphase promoting complex subunit 2.	Ubiquitin specific peptidase 40.	0.721
DNMT1	ENSCPIP00010004314	ENSCPIP00010007701	ENSCPIP00010004314	DNA methyltransferase 1.	annotation not available	0.839
DNMT1	UBA52	ENSCPIP00010007701	ENSCPIP00010007394	DNA methyltransferase 1.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.854
DNMT1	USP40	ENSCPIP00010007701	ENSCPIP00010007290	DNA methyltransferase 1.	Ubiquitin specific peptidase 40.	0.781
ENSCPIP00010004314	ANAPC2	ENSCPIP00010004314	ENSCPIP00010010161	annotation not available	Anaphase promoting complex subunit 2.	0.904
ENSCPIP00010004314	DNMT1	ENSCPIP00010004314	ENSCPIP00010007701	annotation not available	DNA methyltransferase 1.	0.839
ENSCPIP00010004314	ENSCPIP00010006046	ENSCPIP00010004314	ENSCPIP00010006046	annotation not available	annotation not available	0.618
ENSCPIP00010004314	ENSCPIP00010016157	ENSCPIP00010004314	ENSCPIP00010016157	annotation not available	annotation not available	0.618
ENSCPIP00010004314	TRIP12	ENSCPIP00010004314	ENSCPIP00010012889	annotation not available	Thyroid hormone receptor interactor 12.	0.883
ENSCPIP00010004314	UBA52	ENSCPIP00010004314	ENSCPIP00010007394	annotation not available	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.999
ENSCPIP00010004314	USP13	ENSCPIP00010004314	ENSCPIP00010003946	annotation not available	Ubiquitin specific peptidase 13.	0.898
ENSCPIP00010004314	USP40	ENSCPIP00010004314	ENSCPIP00010007290	annotation not available	Ubiquitin specific peptidase 40.	0.897
ENSCPIP00010006046	ENSCPIP00010004314	ENSCPIP00010006046	ENSCPIP00010004314	annotation not available	annotation not available	0.618
ENSCPIP00010006046	UBA52	ENSCPIP00010006046	ENSCPIP00010007394	annotation not available	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.617
ENSCPIP00010006046	USP13	ENSCPIP00010006046	ENSCPIP00010003946	annotation not available	Ubiquitin specific peptidase 13.	0.573
ENSCPIP00010006046	USP40	ENSCPIP00010006046	ENSCPIP00010007290	annotation not available	Ubiquitin specific peptidase 40.	0.686
ENSCPIP00010013185	USP40	ENSCPIP00010013185	ENSCPIP00010007290	annotation not available	Ubiquitin specific peptidase 40.	0.772
ENSCPIP00010016157	ENSCPIP00010004314	ENSCPIP00010016157	ENSCPIP00010004314	annotation not available	annotation not available	0.618