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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USE1Unconventional SNARE in the ER 1. (218 aa)    
Predicted Functional Partners:
STX18
Syntaxin 18.
    
 0.995
BNIP1
BCL2 interacting protein 1.
    
 0.994
YKT6
YKT6 v-SNARE homolog.
    
 0.988
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene).
    
 0.984
RINT1
RAD50 interactor 1.
    
 0.981
ZW10
Zw10 kinetochore protein.
    
 0.979
RPS6KC1
Ribosomal protein S6 kinase C1.
    
 0.977
GOSR1
Golgi SNAP receptor complex member 1.
   
 0.975
STX7
Syntaxin 7.
    
 0.972
ENSCPIP00010000455
annotation not available
    
 0.970
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.