Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DNMT1DNA methyltransferase 1. (1373 aa)    
Predicted Functional Partners:
DNMT3B
DNA methyltransferase 3 beta.
    
 0.999
DNMT3A
DNA methyltransferase 3 alpha.
    
 0.996
PCNA
Proliferating cell nuclear antigen.
   
 
 0.989
UHRF1
Ubiquitin like with PHD and ring finger domains 1.
  
 0.984
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
  
 0.980
USP7
Ubiquitin specific peptidase 7.
   
 
 0.980
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.970
EZH1
Enhancer of zeste 1 polycomb repressive complex 2 subunit.
   
 0.962
KDM1A
Lysine demethylase 1A.
    
 
 0.959
SETD7
SET domain containing 7, histone lysine methyltransferase.
   
 0.953
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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