Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDB2Damage specific DNA binding protein 2. (507 aa)    
Predicted Functional Partners:
DDB1
Damage specific DNA binding protein 1.
    
 0.999
RBX1
Ring-box 1.
    
 0.997
COPS2
COP9 signalosome subunit 2.
    
 0.996
XPC
XPC complex subunit, DNA damage recognition and repair factor.
   
 0.994
COPS3
COP9 signalosome subunit 3.
    
  0.992
COPS4
COP9 signalosome subunit 4.
    
 0.991
GPS1
G protein pathway suppressor 1.
    
  0.990
COPS5
COP9 signalosome subunit 5.
    
 0.990
COPS8
COP9 signalosome subunit 8.
    
 0.990
COPS7B
COP9 signalosome subunit 7B.
    
 0.989
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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