DRG1 protein (Chrysolophus pictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

DRG1

Developmentally regulated GTP binding protein 1. (395 aa)

Predicted Functional Partners:

ZC3H15

0.992

RWDD1

0.942

RWDD4

0.849

RPL8

0.823

RPLP0

0.814

RPL23A

0.809

ENSCPIP00010011527

0.806

MRPS7

0.787

POLE2

0.778

SLC25A1

0.775

Your Current Organism:

Chrysolophus pictus

NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DRG1	ENSCPIP00010011527	ENSCPIP00010008167	ENSCPIP00010011527	Developmentally regulated GTP binding protein 1.	annotation not available	0.806
DRG1	MRPS7	ENSCPIP00010008167	ENSCPIP00010017277	Developmentally regulated GTP binding protein 1.	Mitochondrial ribosomal protein S7.	0.787
DRG1	POLE2	ENSCPIP00010008167	ENSCPIP00010008192	Developmentally regulated GTP binding protein 1.	DNA polymerase epsilon 2, accessory subunit.	0.778
DRG1	RPL23A	ENSCPIP00010008167	ENSCPIP00010016600	Developmentally regulated GTP binding protein 1.	Ribosomal protein L23a.	0.809
DRG1	RPL8	ENSCPIP00010008167	ENSCPIP00010004997	Developmentally regulated GTP binding protein 1.	Ribosomal protein L8.	0.823
DRG1	RPLP0	ENSCPIP00010008167	ENSCPIP00010008248	Developmentally regulated GTP binding protein 1.	Ribosomal protein lateral stalk subunit P0.	0.814
DRG1	RWDD1	ENSCPIP00010008167	ENSCPIP00010001731	Developmentally regulated GTP binding protein 1.	RWD domain containing 1.	0.942
DRG1	RWDD4	ENSCPIP00010008167	ENSCPIP00010000760	Developmentally regulated GTP binding protein 1.	RWD domain containing 4.	0.849
DRG1	SLC25A1	ENSCPIP00010008167	ENSCPIP00010012385	Developmentally regulated GTP binding protein 1.	Solute carrier family 25 member 1.	0.775
DRG1	ZC3H15	ENSCPIP00010008167	ENSCPIP00010016878	Developmentally regulated GTP binding protein 1.	Zinc finger CCCH-type containing 15.	0.992
ENSCPIP00010011527	DRG1	ENSCPIP00010011527	ENSCPIP00010008167	annotation not available	Developmentally regulated GTP binding protein 1.	0.806
ENSCPIP00010011527	MRPS7	ENSCPIP00010011527	ENSCPIP00010017277	annotation not available	Mitochondrial ribosomal protein S7.	0.995
ENSCPIP00010011527	RPL23A	ENSCPIP00010011527	ENSCPIP00010016600	annotation not available	Ribosomal protein L23a.	0.999
ENSCPIP00010011527	RPL8	ENSCPIP00010011527	ENSCPIP00010004997	annotation not available	Ribosomal protein L8.	0.999
ENSCPIP00010011527	RPLP0	ENSCPIP00010011527	ENSCPIP00010008248	annotation not available	Ribosomal protein lateral stalk subunit P0.	0.999
ENSCPIP00010011527	ZC3H15	ENSCPIP00010011527	ENSCPIP00010016878	annotation not available	Zinc finger CCCH-type containing 15.	0.690
MRPS7	DRG1	ENSCPIP00010017277	ENSCPIP00010008167	Mitochondrial ribosomal protein S7.	Developmentally regulated GTP binding protein 1.	0.787
MRPS7	ENSCPIP00010011527	ENSCPIP00010017277	ENSCPIP00010011527	Mitochondrial ribosomal protein S7.	annotation not available	0.995
MRPS7	RPL23A	ENSCPIP00010017277	ENSCPIP00010016600	Mitochondrial ribosomal protein S7.	Ribosomal protein L23a.	0.986
MRPS7	RPL8	ENSCPIP00010017277	ENSCPIP00010004997	Mitochondrial ribosomal protein S7.	Ribosomal protein L8.	0.987