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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHF21APHD finger protein 21A. (679 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
    
 0.986
HMG20B
High mobility group 20B.
    
 0.985
RCOR1
REST corepressor 1.
   
 0.984
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.942
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.931
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.929
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.929
XRCC6
X-ray repair cross complementing 6.
    
 0.928
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.928
XRCC5
X-ray repair cross complementing 5.
    
 0.925
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.