Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RAB15RAB15, member RAS oncogene family. (211 aa)    
Predicted Functional Partners:
ENSCPIP00010013530
annotation not available
    
 0.897
C9orf72
C9orf72-SMCR8 complex subunit.
    
 0.879
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.873
WDR41
WD repeat domain 41.
     
 0.853
SQSTM1
Sequestosome 1.
    
 0.848
MICALL1
MICAL like 1.
    
 0.836
RAB39B
RAB39B, member RAS oncogene family.
     
  0.831
ENSCPIP00010002015
annotation not available
     
  0.831
RAB8B
RAB8B, member RAS oncogene family.
     
  0.831
RAB14
RAB14, member RAS oncogene family.
   
 0.821
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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