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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRIF1Ligand dependent nuclear receptor interacting factor 1. (455 aa)    
Predicted Functional Partners:
RRP15
Ribosomal RNA processing 15 homolog.
      
 0.722
SDAD1
SDA1 domain containing 1.
      
 0.721
ZNF512
Zinc finger protein 512.
      
 0.721
SMCHD1
Structural maintenance of chromosomes flexible hinge domain containing 1.
    
 
 0.622
SRBD1
S1 RNA binding domain 1.
      
 0.620
ZNF362
Zinc finger protein 362.
      
 0.612
PDS5A
PDS5 cohesin associated factor A.
      
 0.583
CBX8
Chromobox 8.
      
 0.578
ZNF451
Zinc finger protein 451.
      
 0.560
PDS5B
PDS5 cohesin associated factor B.
      
 0.537
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.