Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BLM | BRCA2 | ENSCPIP00010008648 | ENSCPIP00010007739 | BLM RecQ like helicase. | BRCA2 DNA repair associated. | 0.773 |
BLM | KNL1 | ENSCPIP00010008648 | ENSCPIP00010001059 | BLM RecQ like helicase. | Kinetochore scaffold 1. | 0.784 |
BLM | RAD51 | ENSCPIP00010008648 | ENSCPIP00010001056 | BLM RecQ like helicase. | RAD51 recombinase. | 0.989 |
BLM | RAD51B | ENSCPIP00010008648 | ENSCPIP00010009568 | BLM RecQ like helicase. | RAD51 paralog B. | 0.866 |
BLM | RAD51C | ENSCPIP00010008648 | ENSCPIP00010004299 | BLM RecQ like helicase. | RAD51 paralog C. | 0.905 |
BLM | RAD51D | ENSCPIP00010008648 | ENSCPIP00010004636 | BLM RecQ like helicase. | RAD51 paralog D. | 0.906 |
BLM | RAD52 | ENSCPIP00010008648 | ENSCPIP00010001676 | BLM RecQ like helicase. | RAD52 homolog, DNA repair protein. | 0.971 |
BLM | WRN | ENSCPIP00010008648 | ENSCPIP00010015330 | BLM RecQ like helicase. | WRN RecQ like helicase. | 0.684 |
BLM | XRCC3 | ENSCPIP00010008648 | ENSCPIP00010009486 | BLM RecQ like helicase. | X-ray repair cross complementing 3. | 0.969 |
BRCA2 | BLM | ENSCPIP00010007739 | ENSCPIP00010008648 | BRCA2 DNA repair associated. | BLM RecQ like helicase. | 0.773 |
BRCA2 | KNL1 | ENSCPIP00010007739 | ENSCPIP00010001059 | BRCA2 DNA repair associated. | Kinetochore scaffold 1. | 0.914 |
BRCA2 | RAD51 | ENSCPIP00010007739 | ENSCPIP00010001056 | BRCA2 DNA repair associated. | RAD51 recombinase. | 0.999 |
BRCA2 | RAD51B | ENSCPIP00010007739 | ENSCPIP00010009568 | BRCA2 DNA repair associated. | RAD51 paralog B. | 0.980 |
BRCA2 | RAD51C | ENSCPIP00010007739 | ENSCPIP00010004299 | BRCA2 DNA repair associated. | RAD51 paralog C. | 0.996 |
BRCA2 | RAD51D | ENSCPIP00010007739 | ENSCPIP00010004636 | BRCA2 DNA repair associated. | RAD51 paralog D. | 0.973 |
BRCA2 | RAD52 | ENSCPIP00010007739 | ENSCPIP00010001676 | BRCA2 DNA repair associated. | RAD52 homolog, DNA repair protein. | 0.884 |
BRCA2 | WRN | ENSCPIP00010007739 | ENSCPIP00010015330 | BRCA2 DNA repair associated. | WRN RecQ like helicase. | 0.986 |
BRCA2 | XRCC3 | ENSCPIP00010007739 | ENSCPIP00010009486 | BRCA2 DNA repair associated. | X-ray repair cross complementing 3. | 0.977 |
KNL1 | BLM | ENSCPIP00010001059 | ENSCPIP00010008648 | Kinetochore scaffold 1. | BLM RecQ like helicase. | 0.784 |
KNL1 | BRCA2 | ENSCPIP00010001059 | ENSCPIP00010007739 | Kinetochore scaffold 1. | BRCA2 DNA repair associated. | 0.914 |
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