KCNK18 protein (Chrysolophus pictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KCNK18

Potassium two pore domain channel subfamily K member 18. (231 aa)

Predicted Functional Partners:

KCNK12

0.721

KCNH2

0.680

KCNK1

0.664

KCNK9

0.661

KCNK3

0.661

ENSCPIP00010016074

0.632

KCNK5

0.624

KCNK2

0.609

KCNC4

0.603

KCNIP1

0.593

Your Current Organism:

Chrysolophus pictus

NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCPIP00010016074	KCNK1	ENSCPIP00010016074	ENSCPIP00010009761	annotation not available	Potassium two pore domain channel subfamily K member 1.	0.579
ENSCPIP00010016074	KCNK12	ENSCPIP00010016074	ENSCPIP00010017885	annotation not available	Potassium two pore domain channel subfamily K member 12.	0.581
ENSCPIP00010016074	KCNK18	ENSCPIP00010016074	ENSCPIP00010012414	annotation not available	Potassium two pore domain channel subfamily K member 18.	0.632
ENSCPIP00010016074	KCNK2	ENSCPIP00010016074	ENSCPIP00010005144	annotation not available	Potassium two pore domain channel subfamily K member 2.	0.564
ENSCPIP00010016074	KCNK3	ENSCPIP00010016074	ENSCPIP00010018430	annotation not available	Potassium two pore domain channel subfamily K member 3.	0.581
ENSCPIP00010016074	KCNK5	ENSCPIP00010016074	ENSCPIP00010016076	annotation not available	Potassium two pore domain channel subfamily K member 5.	0.578
ENSCPIP00010016074	KCNK9	ENSCPIP00010016074	ENSCPIP00010013193	annotation not available	Potassium two pore domain channel subfamily K member 9.	0.581
KCNC4	KCNIP1	ENSCPIP00010004412	ENSCPIP00010012240	Potassium voltage-gated channel subfamily C member 4.	Potassium voltage-gated channel interacting protein 1.	0.594
KCNC4	KCNK18	ENSCPIP00010004412	ENSCPIP00010012414	Potassium voltage-gated channel subfamily C member 4.	Potassium two pore domain channel subfamily K member 18.	0.603
KCNH2	KCNK1	ENSCPIP00010017392	ENSCPIP00010009761	Potassium voltage-gated channel subfamily H member 2.	Potassium two pore domain channel subfamily K member 1.	0.919
KCNH2	KCNK18	ENSCPIP00010017392	ENSCPIP00010012414	Potassium voltage-gated channel subfamily H member 2.	Potassium two pore domain channel subfamily K member 18.	0.680
KCNH2	KCNK2	ENSCPIP00010017392	ENSCPIP00010005144	Potassium voltage-gated channel subfamily H member 2.	Potassium two pore domain channel subfamily K member 2.	0.474
KCNIP1	KCNC4	ENSCPIP00010012240	ENSCPIP00010004412	Potassium voltage-gated channel interacting protein 1.	Potassium voltage-gated channel subfamily C member 4.	0.594
KCNIP1	KCNK18	ENSCPIP00010012240	ENSCPIP00010012414	Potassium voltage-gated channel interacting protein 1.	Potassium two pore domain channel subfamily K member 18.	0.593
KCNK1	ENSCPIP00010016074	ENSCPIP00010009761	ENSCPIP00010016074	Potassium two pore domain channel subfamily K member 1.	annotation not available	0.579
KCNK1	KCNH2	ENSCPIP00010009761	ENSCPIP00010017392	Potassium two pore domain channel subfamily K member 1.	Potassium voltage-gated channel subfamily H member 2.	0.919
KCNK1	KCNK12	ENSCPIP00010009761	ENSCPIP00010017885	Potassium two pore domain channel subfamily K member 1.	Potassium two pore domain channel subfamily K member 12.	0.592
KCNK1	KCNK18	ENSCPIP00010009761	ENSCPIP00010012414	Potassium two pore domain channel subfamily K member 1.	Potassium two pore domain channel subfamily K member 18.	0.664
KCNK1	KCNK2	ENSCPIP00010009761	ENSCPIP00010005144	Potassium two pore domain channel subfamily K member 1.	Potassium two pore domain channel subfamily K member 2.	0.776
KCNK1	KCNK3	ENSCPIP00010009761	ENSCPIP00010018430	Potassium two pore domain channel subfamily K member 1.	Potassium two pore domain channel subfamily K member 3.	0.600