STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPIP00010013008annotation not available (404 aa)    
Predicted Functional Partners:
PRPF3
pre-mRNA processing factor 3.
   
 0.936
PRPF6
pre-mRNA processing factor 6.
   
 0.921
PRPF8
pre-mRNA processing factor 8.
    
 0.919
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 0.918
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.917
LSM8
LSM8 homolog, U6 small nuclear RNA associated.
   
 0.899
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
  0.894
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.894
SF3A1
Splicing factor 3a subunit 1.
   
 0.893
ENSCPIP00010004449
annotation not available
   
 0.891
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.