KLF12 protein (Chrysolophus pictus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KLF12

Kruppel like factor 12. (396 aa)

Predicted Functional Partners:

AK9

0.746

SEL1L3

0.595

ENSCPIP00010013966

0.553

ENSCPIP00010013971

0.553

DCAKD

0.537

FRMD4A

0.534

MYSM1

0.528

REL

0.511

SRBD1

0.492

PARD3B

0.483

Your Current Organism:

Chrysolophus pictus

NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AK9	DCAKD	ENSCPIP00010016956	ENSCPIP00010003244	Adenylate kinase 9.	dephospho-CoA kinase domain containing.	0.510
AK9	KLF12	ENSCPIP00010016956	ENSCPIP00010014362	Adenylate kinase 9.	Kruppel like factor 12.	0.746
DCAKD	AK9	ENSCPIP00010003244	ENSCPIP00010016956	dephospho-CoA kinase domain containing.	Adenylate kinase 9.	0.510
DCAKD	FRMD4A	ENSCPIP00010003244	ENSCPIP00010007359	dephospho-CoA kinase domain containing.	FERM domain containing 4A.	0.612
DCAKD	KLF12	ENSCPIP00010003244	ENSCPIP00010014362	dephospho-CoA kinase domain containing.	Kruppel like factor 12.	0.537
DCAKD	PARD3B	ENSCPIP00010003244	ENSCPIP00010016709	dephospho-CoA kinase domain containing.	Par-3 family cell polarity regulator beta.	0.614
ENSCPIP00010013966	ENSCPIP00010013971	ENSCPIP00010013966	ENSCPIP00010013971	annotation not available	annotation not available	0.918
ENSCPIP00010013966	KLF12	ENSCPIP00010013966	ENSCPIP00010014362	annotation not available	Kruppel like factor 12.	0.553
ENSCPIP00010013966	SEL1L3	ENSCPIP00010013966	ENSCPIP00010015848	annotation not available	SEL1L family member 3.	0.670
ENSCPIP00010013971	ENSCPIP00010013966	ENSCPIP00010013971	ENSCPIP00010013966	annotation not available	annotation not available	0.918
ENSCPIP00010013971	KLF12	ENSCPIP00010013971	ENSCPIP00010014362	annotation not available	Kruppel like factor 12.	0.553
ENSCPIP00010013971	SEL1L3	ENSCPIP00010013971	ENSCPIP00010015848	annotation not available	SEL1L family member 3.	0.670
FRMD4A	DCAKD	ENSCPIP00010007359	ENSCPIP00010003244	FERM domain containing 4A.	dephospho-CoA kinase domain containing.	0.612
FRMD4A	KLF12	ENSCPIP00010007359	ENSCPIP00010014362	FERM domain containing 4A.	Kruppel like factor 12.	0.534
FRMD4A	PARD3B	ENSCPIP00010007359	ENSCPIP00010016709	FERM domain containing 4A.	Par-3 family cell polarity regulator beta.	0.660
KLF12	AK9	ENSCPIP00010014362	ENSCPIP00010016956	Kruppel like factor 12.	Adenylate kinase 9.	0.746
KLF12	DCAKD	ENSCPIP00010014362	ENSCPIP00010003244	Kruppel like factor 12.	dephospho-CoA kinase domain containing.	0.537
KLF12	ENSCPIP00010013966	ENSCPIP00010014362	ENSCPIP00010013966	Kruppel like factor 12.	annotation not available	0.553
KLF12	ENSCPIP00010013971	ENSCPIP00010014362	ENSCPIP00010013971	Kruppel like factor 12.	annotation not available	0.553
KLF12	FRMD4A	ENSCPIP00010014362	ENSCPIP00010007359	Kruppel like factor 12.	FERM domain containing 4A.	0.534