STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH18Cadherin 18. (824 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.926
JUP
Junction plakoglobin.
    
 0.922
CDH6
Cadherin 6.
   
0.897
CDH13
Cadherin 13.
     
0.896
CDH20
Cadherin 20.
     
0.894
CDH17
Cadherin 17.
     
0.890
CDH8
Cadherin 8.
   
 
0.861
CDH11
Cadherin 11.
  
 
0.843
CDH19
Cadherin 19.
     
0.825
CTNND1
Catenin delta 1.
   
 0.661
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.