STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL5A2Collagen type V alpha 2 chain. (1203 aa)    
Predicted Functional Partners:
COL11A2
Collagen type XI alpha 2 chain.
  
  
0.952
COL11A1
Collagen type XI alpha 1 chain.
     
0.951
LUM
Lumican.
   
 0.558
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
      
 0.539
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.533
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
 0.516
ENSCPIP00010000939
annotation not available
   
0.503
PCOLCE2
Procollagen C-endopeptidase enhancer 2.
   
 0.464
ITGB6
Integrin subunit beta 6.
    
 0.463
C1QC
Complement C1q C chain.
  
 
 
0.462
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.