STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBTUB bipartite transcription factor. (547 aa)    
Predicted Functional Partners:
TTC21B
Tetratricopeptide repeat domain 21B.
    
 0.704
IFT122
Intraflagellar transport 122.
    
 0.678
WDR19
WD repeat domain 19.
    
 0.672
IFT140
Intraflagellar transport 140.
    
 0.668
WDR35
WD repeat domain 35.
    
 0.628
ETNK2
Ethanolamine kinase 2.
    
 
 0.604
ETNK1
Ethanolamine kinase 1.
    
 
 0.593
ARL13B
ADP ribosylation factor like GTPase 13B.
   
  
 0.578
GPR161
G protein-coupled receptor 161.
     
 0.539
LONP1
Lon peptidase 1, mitochondrial.
      
 0.470
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.