STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIF1Replication timing regulatory factor 1. (2028 aa)    
Predicted Functional Partners:
PAXIP1
PAX interacting protein 1.
   
 0.947
TP53BP1
Tumor protein p53 binding protein 1.
    
 0.797
ATM
ATM serine/threonine kinase.
   
 0.748
BARD1
BRCA1 associated RING domain 1.
    
 0.738
ENSCPIP00010013545
annotation not available
    
 
 0.724
XRCC6
X-ray repair cross complementing 6.
     
 0.677
BRCA1
BRCA1 DNA repair associated.
   
 0.674
PIAS4
Protein inhibitor of activated STAT 4.
    
 0.664
NBN
Nibrin.
    
 0.661
ENSCPIP00010008646
annotation not available
   
    0.658
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.