STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PCMT1protein-L-isoaspartate (D-aspartate) O-methyltransferase. (197 aa)    
Predicted Functional Partners:
BORCS5
BLOC-1 related complex subunit 5.
      
 0.650
ARSJ
Arylsulfatase family member J.
      
 0.592
PFDN4
Prefoldin subunit 4.
   
  
 0.570
PREPL
Prolyl endopeptidase like.
      
 0.545
CARD10
Caspase recruitment domain family member 10.
      
 0.544
RNMT
RNA guanine-7 methyltransferase.
   
  
 0.540
KATNA1
Katanin catalytic subunit A1.
  
  
 0.466
RAN
RAN, member RAS oncogene family.
   
  
 0.464
AGPAT5
1-acylglycerol-3-phosphate O-acyltransferase 5.
      
 0.457
ARHGAP28
Rho GTPase activating protein 28.
      
 0.457
Your Current Organism:
Chrysolophus pictus
NCBI taxonomy Id: 9089
Other names: C. pictus, golden pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.