STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB27568.1Hypothetical protein; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldK. (488 aa)    
Predicted Functional Partners:
gldM
PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM.
 
   
 0.973
gldL
TIGRFAM: gliding motility-associated protein GldL.
 
   
 0.972
AGB27567.1
PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; manually curated.
 
  
 0.961
gldN
TIGRFAM: gliding motility associated protien GldN.
 
   
 0.960
porT
Hypothetical protein.
 
   
 0.894
AGB28290.1
Hypothetical protein.
 
   
 0.856
AGB27761.1
Hypothetical protein.
  
   
 0.832
AGB28470.1
Long-chain fatty acid transport protein.
  
   
 0.822
AGB28985.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
 
  
 0.784
AGB28606.1
Hypothetical protein.
 
     0.760
Your Current Organism:
Prevotella dentalis
NCBI taxonomy Id: 908937
Other names: P. dentalis DSM 3688, Prevotella dentalis ATCC 49559, Prevotella dentalis DSM 3688, Prevotella dentalis JCM 13448, Prevotella dentalis str. DSM 3688, Prevotella dentalis strain DSM 3688
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