STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_0211Acyl-CoA dehydrogenase, short-chain specific. (395 aa)    
Predicted Functional Partners:
UO65_2824
Electron transfer flavoprotein, alpha subunit.
   0.869
UO65_2823
Electron transfer flavoprotein, beta subunit.
 
   0.852
UO65_3772
Isovaleryl-CoA dehydrogenase.
  
  
  0.844
UO65_5778
Butyryl-CoA dehydrogenase.
  
  
  0.842
UO65_0205
Acyl-CoA dehydrogenase, short-chain specific.
 
     0.825
UO65_3763
Enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase.
  
 0.821
UO65_0212
Acyl-CoA dehydrogenase, short-chain specific.
 
    
0.817
UO65_1173
Enoyl-CoA hydratase.
   
 0.808
UO65_0215
Chalcone synthase.
  
  0.804
UO65_0204
Butyryl-CoA dehydrogenase.
 
     0.803
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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