STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_0522Transcriptional regulator, ArsR family. (178 aa)    
Predicted Functional Partners:
UO65_0524
Peptidase S9 prolyl oligopeptidase active site domain protein.
 
     0.635
UO65_4169
Acylamino-acid-releasing enzyme.
  
     0.565
UO65_0523
N-acyl-L-amino acid amidohydrolase.
       0.549
UO65_0525
Putative membrane transport protein.
       0.472
UO65_0521
Hypothetical protein.
       0.435
UO65_1182
Hypothetical protein.
  
     0.421
UO65_5648
Cold shock protein CspA.
  
     0.421
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.