STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_1180Iron utilization protein. (259 aa)    
Predicted Functional Partners:
UO65_0800
Polyketide synthase.
  
  
 0.598
UO65_1871
Non-ribosomal peptide synthetase.
  
  
 0.598
UO65_2543
2,3-dihydroxybenzoate-AMP ligase.
 
  
 0.585
UO65_0787
2,3-dihydroxybenzoate-AMP ligase.
 
  
 0.573
UO65_1179
Amidase; Belongs to the amidase family.
       0.556
UO65_1178
Putative transcriptional regulator.
       0.551
htpX
Peptidase M48, Ste24p precursor; Belongs to the peptidase M48B family.
       0.546
UO65_0785
Isochorismatase of siderophore biosynthesis.
 
    0.495
UO65_4657
Putative metal chaperone; Involved in Zn homeostasis, GTPase of COG0523 family.
  
     0.457
UO65_1182
Hypothetical protein.
       0.448
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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