STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_1421Hypothetical protein. (75 aa)    
Predicted Functional Partners:
UO65_1419
Putative transferase.
 
     0.805
UO65_1420
Putative transferase.
 
     0.804
UO65_1428
Glycosyltransferase.
 
     0.706
UO65_1429
Glycosyl transferase, group 1.
  
     0.681
UO65_1417
Cytochrome P450.
 
     0.586
UO65_1418
Hypothetical protein; Belongs to the anti-sigma-factor antagonist family.
       0.584
UO65_1427
D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase; Putative Histidinol-phosphatase.
 
     0.573
UO65_1432
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.566
UO65_2322
Hypothetical protein.
  
     0.520
UO65_1422
Sugar ABC transporter, sugar-binding protein.
       0.506
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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