STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_1613Putative metal-dependent hydrolase. (173 aa)    
Predicted Functional Partners:
UO65_4556
Hypothetical protein; FIG00819990.
  
     0.560
UO65_1614
UBA/THIF-type NAD/FAD binding protein.
       0.555
UO65_3290
Hypothetical protein; FIG00819990.
  
     0.534
UO65_1616
Ubiquinone biosynthesis monooxygenase UbiB.
       0.533
UO65_1622
ATP-dependent DNA helicase UvrD/PcrA, actinomycete.
      0.516
UO65_0166
Putative metal-dependent hydrolase.
  
     0.508
UO65_2788
Hypothetical protein; FIG00820885.
  
     0.429
UO65_0167
Type I restriction-modification system, restriction subunit R; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
   
 0.410
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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