STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_1798Hypothetical protein. (130 aa)    
Predicted Functional Partners:
UO65_1797
Alginate biosynthesis regulatory protein AlgR (lytT).
 
     0.950
UO65_1799
Sodium:solute symporter, SSF; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.907
UO65_1795
Putative two-component system sensor kinase.
 
     0.872
UO65_1774
ATP-binding region, ATPase-like protein.
 
     0.767
UO65_1773
Putative two-component system response regulator.
 
     0.755
UO65_1771
Putative transmembrane transport protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.667
UO65_1796
Putative signal peptide peptidase.
       0.564
UO65_4963
Isoniazid inducible gene protein iniC.
  
     0.540
UO65_1800
Rhodanese-related sulfurtransferase.
       0.507
UO65_1801
Putative conserved membrane protein.
       0.507
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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