STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_2383Hypothetical protein. (422 aa)    
Predicted Functional Partners:
UO65_4822
Putative substrate--CoA ligase.
 
  
 0.822
UO65_4991
Hypothetical protein; FIG01129232.
  
  
  0.782
UO65_2382
Hypothetical protein; FIG00511601.
       0.773
UO65_0800
Polyketide synthase.
    
  0.753
UO65_1024
Putative secreted protein.
  
     0.753
UO65_1871
Non-ribosomal peptide synthetase.
    
  0.753
UO65_0665
Polysaccharide pyruvyl transferase.
  
  
  0.734
UO65_3075
DNA polymerase III subunits gamma and tau.
  
     0.710
UO65_0971
Siderophore biosynthesis non-ribosomal peptide synthetase module; Bacillibactin synthetase component F.
    
  0.699
rplT
LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
 
   0.697
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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