STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_2433Transcriptional regulator, GntR family. (211 aa)    
Predicted Functional Partners:
UO65_2434
OsmC/Ohr family protein.
       0.773
UO65_2592
Transcriptional regulator, GntR family.
  
     0.740
UO65_4923
Transcriptional regulator, IclR family.
  
    0.586
UO65_6680
Nicotinamide-nucleotide adenylyltransferase, NadR family; Ribosylnicotinamide kinase.
   
  
 0.565
UO65_0267
Acetolactate synthase small subunit.
  
    0.555
UO65_5086
Transcriptional regulator, IclR family.
  
    0.531
UO65_6072
Transcriptional regulator, GntR family.
 
  
 0.484
UO65_1387
CrtV-methyltransferase-like protein.
     
 0.439
UO65_5615
Transcriptional regulator, GntR family.
 
  
0.414
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.