STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_2596Putative carboxymethylenebutenolidase. (220 aa)    
Predicted Functional Partners:
UO65_3621
Dienelactone hydrolase family.
  
  
  0.920
UO65_0472
Dienelactone hydrolase family.
  
  
  0.892
UO65_5252
Intradiol ring-cleavage dioxygenase.
  
 
  0.777
UO65_2597
Hypothetical protein.
       0.773
pat
Biosynthetic Aromatic amino acid aminotransferase beta; May catalyze the transamination reaction in phenylalanine biosynthesis; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
       0.578
UO65_2019
Hypothetical protein; FIG00995901.
  
     0.554
UO65_2930
Putative conserved membrane protein.
  
     0.545
UO65_3995
Hyprothetical protein.
  
     0.537
UO65_6400
Hypothetical protein; FIG01039007.
  
     0.512
UO65_5030
Putative glycoprotein.
  
     0.465
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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