STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_2658L-proline glycine betaine ABC transport system permease protein ProV; TCDB 3.A.1.12.1. (378 aa)    
Predicted Functional Partners:
UO65_2659
L-proline glycine betaine ABC transport system permease protein ProW; TCDB 3.A.1.12.1.
 
 0.997
UO65_2661
L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1.
 0.996
UO65_2660
Glycine betaine ABC transport system permease protein.
 0.995
UO65_6445
L-proline glycine betaine binding ABC transporter protein ProX; TCDB 3.A.1.12.1; Osmotic adaptation.
 0.986
UO65_6448
ABC quaternary amine transporter, permease component.
 0.981
UO65_6446
Putative ABC transporter permease.
 0.979
UO65_3091
Lipid A export ATP-binding/permease protein MsbA.
 
     
0.898
UO65_0087
Methionine ABC transporter ATP-binding protein.
 
     
0.895
UO65_5314
Lipid A export ATP-binding/permease protein MsbA.
 
     
0.895
UO65_5987
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.886
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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