STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_2862Putative hydrolase. (261 aa)    
Predicted Functional Partners:
UO65_0800
Polyketide synthase.
  
 0.802
UO65_1871
Non-ribosomal peptide synthetase.
  
 0.802
UO65_4692
Malonyl CoA-acyl carrier protein transacylase.
  
 0.737
UO65_2861
Protein of unknown function UPF0089.
 
     0.690
UO65_0528
Non-ribosomal peptide synthetase.
  
 0.637
UO65_1872
Non-ribosomal peptide synthetase.
  
 0.637
UO65_0970
Non-ribosomal peptide synthase.
   
  0.618
UO65_2557
Siderophore biosynthesis non-ribosomal peptide synthetase module.
   
  0.618
UO65_0971
Siderophore biosynthesis non-ribosomal peptide synthetase module; Bacillibactin synthetase component F.
   
 0.582
UO65_0808
Hypothetical protein; FIG01294969.
   
  0.577
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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