STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_2963Putative glycosyl transferase. (298 aa)    
Predicted Functional Partners:
UO65_2965
O-antigen export system permease protein RfbD.
 
  
 0.973
UO65_2964
O-antigen/lipopolysaccharide transport ATP-binding protein ABC transporter RfbE.
 
  
 0.927
UO65_2952
UDP-galactopyranose mutase.
 
  
 0.834
UO65_5492
Sugar transferase; Involved in lipopolysaccharide synthesis.
  
 
 0.797
UO65_5586
Undecaprenyl-phosphate galactosephosphotransferase.
  
 
 0.797
UO65_1075
Hypothetical protein.
  
     0.750
UO65_6102
Hypothetical protein.
  
     0.741
UO65_3997
Hypothetical protein; FIG026501.
  
     0.716
UO65_1813
Hypothetical protein.
  
     0.704
UO65_1144
Putative membrane protein.
  
     0.629
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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