STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_3076Hypothetical protein. (514 aa)    
Predicted Functional Partners:
UO65_3075
DNA polymerase III subunits gamma and tau.
 
     0.853
UO65_6512
Chitinase; Belongs to the glycosyl hydrolase 18 family.
  
 0.720
UO65_6392
Regulator.
  
     0.672
UO65_3995
Hyprothetical protein.
 
   0.663
UO65_3467
Hypothetical protein.
  
     0.618
UO65_0820
Hypothetical protein.
  
     0.612
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.601
UO65_6368
Rhs protein.
  
     0.590
UO65_1954
Putative conserved integral membrane protein.
  
     0.588
UO65_6227
Hypothetical protein.
  
     0.582
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.