STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_3119MCE-family protein Mce1A. (413 aa)    
Predicted Functional Partners:
UO65_3122
Methionine ABC transporter ATP-binding protein.
 
 0.995
UO65_3120
Conserved hypothetical integral membrane protein YrbE1B.
 
 0.994
UO65_1206
Conserved hypothetical integral membrane protein YrbE1A.
 
 0.984
UO65_3115
MCE-family lipoprotein LprK (MCE-family lipoprotein Mce1e).
 
 
 0.984
UO65_3117
MCE-family protein Mce1C.
 
 
 0.984
UO65_3116
MCE-family protein Mce1D.
 
 
 0.981
UO65_1205
Methionine ABC transporter ATP-binding protein.
 
 0.980
UO65_3121
Conserved hypothetical integral membrane protein YrbE1A.
 
  0.980
UO65_1207
Conserved hypothetical integral membrane protein YrbE1B.
 
 0.978
UO65_3118
MCE-family protein Mce1B.
 
0.951
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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