STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_3335Carboxypeptidase T. (551 aa)    
Predicted Functional Partners:
UO65_2488
Aminopeptidase Y (Arg, Lys, Leu preference).
 
  
  0.629
UO65_5307
Macrolide glycosyl transferase.
  
     0.566
UO65_4170
Protease inhibitor, SSI family (subtilisin inhibitor); Belongs to the protease inhibitor I16 (SSI) family.
  
 
  0.506
UO65_2013
Copper binding protein, plastocyanin/azurin family.
  
  
  0.472
UO65_4913
Putative hydrolase.
  
 
  0.468
UO65_5284
Hypothetical protein; FIG01121735.
  
     0.451
UO65_4178
Extracellular ribonuclease Bsn.
  
  
  0.449
UO65_1767
Hydrolase.
  
  
  0.441
UO65_0720
Regulatory protein, LuxR.
  
     0.421
UO65_5313
Malonyl CoA-acyl carrier protein transacylase.
  
     0.417
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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