STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_4406Transcriptional regulator, MarR family. (151 aa)    
Predicted Functional Partners:
UO65_0059
Superfamily I DNA and RNA helicase and helicase subunit.
  
     0.600
UO65_4405
Hypothetical protein; FIG01131388.
       0.546
coaE
Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
    
  0.533
UO65_5406
Putative hydrolase.
  
     0.501
UO65_4404
Hypothetical protein.
       0.485
UO65_3762
excisionase/Xis, DNA-binding.
  
     0.439
UO65_6359
Hypothetical protein.
  
     0.430
UO65_2574
5'-nucleotidase; Belongs to the 5'-nucleotidase family.
  
  
  0.428
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.