STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_4484Germacradienol synthase. (732 aa)    
Predicted Functional Partners:
UO65_0911
Octaprenyl diphosphate synthase; Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.932
UO65_6608
Octaprenyl diphosphate synthase; Dimethylallyltransferase; Geranyltranstransferase; Geranylgeranyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.892
UO65_1168
Octaprenyl-diphosphate synthase; Dimethylallyltransferase; Geranyltranstransferase (farnesyldiphosphate synthase); Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
 
   
 0.872
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.825
UO65_0912
cAMP-binding protein.
 
  
  0.825
UO65_0914
cAMP-binding protein.
 
  
  0.825
UO65_1386
Glutamate synthase large chain.
    
 0.819
UO65_3315
Glutamate synthase large chain.
    
 0.819
UO65_6607
Pentalenene synthase (PS) (Sesquiterpene synthase) (Sesquiterpene cyclase).
  
  
 
0.786
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
 0.760
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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