STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_4492ErfK/YbiS/YcfS/YnhG family protein. (431 aa)    
Predicted Functional Partners:
UO65_0245
Putative Methionine synthase, vitamin-B12 independent.
  
     0.696
UO65_5255
D-alanyl-D-alanine carboxypeptidase.
  
  
 0.612
UO65_4491
Bifunctional protein: zinc-containing alcohol dehydrogenase; Quinone oxidoreductase (NADPH:quinone reductase).
       0.572
UO65_3290
Hypothetical protein; FIG00819990.
  
     0.557
zwf-2
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
       0.516
UO65_1288
Putative secreted/membrane protein.
  
     0.474
UO65_5202
Putative serine protease.
 
     0.459
UO65_5895
Hypothetical protein; FIG024795.
  
     0.457
UO65_4556
Hypothetical protein; FIG00819990.
  
     0.435
UO65_6441
Hypothetical protein.
  
     0.435
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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