STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_4633Urea ABC transporter, permease protein UrtC; Belongs to the binding-protein-dependent transport system permease family. (362 aa)    
Predicted Functional Partners:
UO65_4632
Urea ABC transporter, ATPase protein UrtD.
 
 0.999
UO65_4634
Urea ABC transporter, permease protein UrtB; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
UO65_4635
Urea ABC transporter, substrate binding protein UrtA.
 
 
 0.998
UO65_4631
Urea ABC transporter, ATPase protein UrtE.
 
 0.993
UO65_2288
High-affinity branched-chain amino acid transport system permease protein LivH; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.984
UO65_2290
Branched-chain amino acid transport ATP-binding protein LivG; TCDB 3.A.1.4.1.
 
 0.981
UO65_4766
Branched-chain amino acid transport ATP-binding protein LivG; TCDB 3.A.1.4.1.
 
 0.975
UO65_4289
Branched-chain amino acid transport ATP-binding protein LivG; TCDB 3.A.1.4.1.
 
 0.969
UO65_4290
Branched-chain amino acid transport ATP-binding protein LivF; TCDB 3.A.1.4.1.
 
 0.967
UO65_4764
High-affinity branched-chain amino acid transport system permease protein LivH; TCDB 3.A.1.4.1; Belongs to the binding-protein-dependent transport system permease family.
 
 0.964
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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