STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_4837ABC transporter sugar-binding protein. (414 aa)    
Predicted Functional Partners:
UO65_4838
Sugar ABC transporter permeases protein.
 
  0.998
UO65_4839
N-Acetyl-D-glucosamine ABC transport system, permease protein 2.
 
 0.986
UO65_5052
Various polyols ABC transporter, permease component 2.
 
 0.950
UO65_6510
Maltose/maltodextrin ABC transporter, permease protein MalG.
 
 0.928
UO65_6153
Maltose/maltodextrin ABC transporter, permease protein MalF.
 
 0.921
UO65_5053
Various polyols ABC transporter, permease component 1.
 
  0.911
UO65_3474
ABC sugar transporter, permease component.
  
 0.910
UO65_3473
Inositol transport system permease protein.
  
 0.906
UO65_6154
Maltose/maltodextrin ABC transporter, permease protein MalG.
  
 0.906
UO65_4119
Multiple sugar transport system permease protein.
 
 0.890
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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