STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UO65_4839N-Acetyl-D-glucosamine ABC transport system, permease protein 2. (262 aa)    
Predicted Functional Partners:
UO65_4838
Sugar ABC transporter permeases protein.
 
  0.992
UO65_4837
ABC transporter sugar-binding protein.
 
 0.986
UO65_3472
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TCDB 3.A.1.1.3; Belongs to the ABC transporter superfamily.
 0.982
UO65_4119
Multiple sugar transport system permease protein.
 0.981
UO65_1862
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TCDB 3.A.1.1.3; Belongs to the ABC transporter superfamily.
 0.972
UO65_3549
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TCDB 3.A.1.1.3; Belongs to the ABC transporter superfamily.
 0.972
UO65_6151
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TCDB 3.A.1.1.3; Belongs to the ABC transporter superfamily.
 0.972
UO65_1860
Binding-protein-dependent transport systems inner membrane component.
 
  0.970
UO65_6153
Maltose/maltodextrin ABC transporter, permease protein MalF.
 0.961
UO65_3474
ABC sugar transporter, permease component.
 0.958
Your Current Organism:
Actinokineospora spheciospongiae
NCBI taxonomy Id: 909613
Other names: A. spheciospongiae, Actinokineospora sp. EG49, Actinokineospora spheciospongiae Kampfer et al. 2015 emend. Nouioui et al. 2018, CCM 8480, DSM 45935, LMG 27700, LMG:27700, strain EG49
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